Use bower to handle external dependencies

.gitignore

 target
+components
 .idea
 .settings
 .classpath

src/main/webapp/README.md

+To get up and running:
+
+ $ npm install -g bower
+ $ cd src/main/webapp/
+ $ bower install

src/main/webapp/component.json

+{
+  "name": "TabulationMobile",
+  "version": "0.0.1",
+  "ignore": [
+    "**/.*",
+    "node_modules",
+    "components"
+  ],
+  "dependencies": {
+     "dojo": "1.8.3",
+     "dojox": "1.8.3",
+     "dijit": "1.8.3",
+   }
+}

src/main/webapp/index.html

@@ -6,14 +6,9 @@
     <meta charset="utf-8">
 
     <title>Nesstar Mobile</title>
-    <link href="http://ajax.googleapis.com/ajax/libs/dojo/1.8.1/dojox/mobile/themes/iphone/iphone.css" rel="stylesheet"></link>
     <link rel="stylesheet" type="text/css" href="css/overlay.css"></link>
-    <!-- <link rel="stylesheet" type="text/css" href="css/sidebar.css"/> -->
-    <!-- <link rel="stylesheet" type="text/css" href="css/style.css"> -->
     <link rel="apple-touch-icon" href="images/apple-touch-icon.png"> 
     <link rel="apple-touch-icon-precomposed" href="images/apple-touch-icon.png">
-    <script src="js/dojo/dojo.js" data-dojo-config="async:true"></script>
-    
 </head>
 
 
@@ -30,12 +25,14 @@
                 packages: [
                     {
                         name: 'nesstarmobile',
-                        location: base + '/js/nesstarmobile'
+                        location: base +  '/js/'
                     }
                 ]
             };
         })();
     </script>
+    
+    <script src="components/dojo/dojo.js" data-dojo-config="async: true"></script>
 
     <script>
         var splash;
@@ -43,7 +40,7 @@
             function(declare, dom, domStyle, fx) {
                 var SplashScreen = declare(null, {
                     overlayNode: 'splash',
-                    
+
                     endLoading: function() {
                         this.doFadeAndHiding();
                     },
@@ -80,7 +77,7 @@
             function(parser) {
                 parser.parse();
             });
-            
+
         })
     </script>
     <!-- select study view -->

src/main/webapp/js/dijit/BackgroundIframe.js

-//>>built
-define("dijit/BackgroundIframe",["require","./main","dojo/_base/config","dojo/dom-construct","dojo/dom-style","dojo/_base/lang","dojo/on","dojo/sniff","dojo/_base/window"],function(_1,_2,_3,_4,_5,_6,on,_7,_8){
-var _9=new function(){
-var _a=[];
-this.pop=function(){
-var _b;
-if(_a.length){
-_b=_a.pop();
-_b.style.display="";
-}else{
-if(_7("ie")<9){
-var _c=_3["dojoBlankHtmlUrl"]||_1.toUrl("dojo/resources/blank.html")||"javascript:\"\"";
-var _d="<iframe src='"+_c+"' role='presentation'"+" style='position: absolute; left: 0px; top: 0px;"+"z-index: -1; filter:Alpha(Opacity=\"0\");'>";
-_b=_8.doc.createElement(_d);
-}else{
-_b=_4.create("iframe");
-_b.src="javascript:\"\"";
-_b.className="dijitBackgroundIframe";
-_b.setAttribute("role","presentation");
-_5.set(_b,"opacity",0.1);
-}
-_b.tabIndex=-1;
-}
-return _b;
-};
-this.push=function(_e){
-_e.style.display="none";
-_a.push(_e);
-};
-}();
-_2.BackgroundIframe=function(_f){
-if(!_f.id){
-throw new Error("no id");
-}
-if(_7("ie")||_7("mozilla")){
-var _10=(this.iframe=_9.pop());
-_f.appendChild(_10);
-if(_7("ie")<7||_7("quirks")){
-this.resize(_f);
-this._conn=on(_f,"resize",_6.hitch(this,function(){
-this.resize(_f);
-}));
-}else{
-_5.set(_10,{width:"100%",height:"100%"});
-}
-}
-};
-_6.extend(_2.BackgroundIframe,{resize:function(_11){
-if(this.iframe){
-_5.set(this.iframe,{width:_11.offsetWidth+"px",height:_11.offsetHeight+"px"});
-}
-},destroy:function(){
-if(this._conn){
-this._conn.remove();
-this._conn=null;
-}
-if(this.iframe){
-_9.push(this.iframe);
-delete this.iframe;
-}
-}});
-return _2.BackgroundIframe;
-});

src/main/webapp/js/dijit/BackgroundIframe.js.uncompressed.js

-define("dijit/BackgroundIframe", [
-	"require",			// require.toUrl
-	"./main",	// to export dijit.BackgroundIframe
-	"dojo/_base/config",
-	"dojo/dom-construct", // domConstruct.create
-	"dojo/dom-style", // domStyle.set
-	"dojo/_base/lang", // lang.extend lang.hitch
-	"dojo/on",
-	"dojo/sniff", // has("ie"), has("mozilla"), has("quirks")
-	"dojo/_base/window" // win.doc.createElement
-], function(require, dijit, config, domConstruct, domStyle, lang, on, has, win){
-
-	// module:
-	//		dijit/BackgroundIFrame
-
-	// TODO: remove _frames, it isn't being used much, since popups never release their
-	// iframes (see [22236])
-	var _frames = new function(){
-		// summary:
-		//		cache of iframes
-
-		var queue = [];
-
-		this.pop = function(){
-			var iframe;
-			if(queue.length){
-				iframe = queue.pop();
-				iframe.style.display="";
-			}else{
-				if(has("ie") < 9){
-					var burl = config["dojoBlankHtmlUrl"] || require.toUrl("dojo/resources/blank.html") || "javascript:\"\"";
-					var html="<iframe src='" + burl + "' role='presentation'"
-						+ " style='position: absolute; left: 0px; top: 0px;"
-						+ "z-index: -1; filter:Alpha(Opacity=\"0\");'>";
-					iframe = win.doc.createElement(html);
-				}else{
-					iframe = domConstruct.create("iframe");
-					iframe.src = 'javascript:""';
-					iframe.className = "dijitBackgroundIframe";
-					iframe.setAttribute("role", "presentation");
-					domStyle.set(iframe, "opacity", 0.1);
-				}
-				iframe.tabIndex = -1; // Magic to prevent iframe from getting focus on tab keypress - as style didn't work.
-			}
-			return iframe;
-		};
-